Dca7842.1
Annotation
- 3-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1321)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7842.1 |
8 |
453 |
481 |
37 |
446 |
37 |
4e-94
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
180 |
666 |
1114 |
43.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7842.1 |
3 |
450 |
481 |
29.31 |
448 |
30 |
1e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
99 |
571 |
857 |
55.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1321 |
Augustus |
mRNA |
29 |
1694 |
. |
- |
. |
ID=Dca7842.1;Parent=Dca7842 |
| scaffold1321 |
Augustus |
exon |
29 |
110 |
. |
- |
. |
ID=Dca7842.1.exon1;Parent=Dca7842.1 |
| scaffold1321 |
Augustus |
exon |
212 |
1257 |
. |
- |
. |
ID=Dca7842.1.exon2;Parent=Dca7842.1 |
| scaffold1321 |
Augustus |
exon |
1380 |
1694 |
. |
- |
. |
ID=Dca7842.1.exon3;Parent=Dca7842.1 |
