Carnation DB

Dca7970.1

Annotation

10-exons
f-1
sp|B9GSD8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816702#GO:0005737;GO:0008270#1F0P1C
sp|B9T078_RICCO#Pcdc2/rp-8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0769340#GO:0005737;GO:0008270#1F0P1C
Repeat List (scaffold1328)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7970.1	54	415	423	54.84	362	64	2e-135
Target_name	Start	End	Length	Cov(%)
sp\|B9GSD8_POPTR	48	394	400	86.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7970.1	9	420	423	56.26	412	58	1e-130
Target_name	Start	End	Length	Cov(%)
AT4G02220.1	5	418	418	99.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1328	Augustus	mRNA	67455	72438	.	+	.	ID=Dca7970.1;Parent=Dca7970
scaffold1328	Augustus	exon	67455	67697	.	+	.	ID=Dca7970.1.exon1;Parent=Dca7970.1
scaffold1328	Augus-PASA	exon	67777	67860	.	+	.	ID=Dca7970.1.exon2;Parent=Dca7970.1
scaffold1328	Augus-PASA	exon	68413	68546	.	+	.	ID=Dca7970.1.exon3;Parent=Dca7970.1
scaffold1328	Augus-PASA	exon	68670	68767	.	+	.	ID=Dca7970.1.exon4;Parent=Dca7970.1
scaffold1328	Augus-PASA	exon	69617	69705	.	+	.	ID=Dca7970.1.exon5;Parent=Dca7970.1
scaffold1328	Augus-PASA	exon	69792	69903	.	+	.	ID=Dca7970.1.exon6;Parent=Dca7970.1
scaffold1328	Augustus	exon	70974	71131	.	+	.	ID=Dca7970.1.exon7;Parent=Dca7970.1
scaffold1328	Augustus	exon	71236	71306	.	+	.	ID=Dca7970.1.exon8;Parent=Dca7970.1
scaffold1328	Augustus	exon	72070	72184	.	+	.	ID=Dca7970.1.exon9;Parent=Dca7970.1
scaffold1328	Augustus	exon	72271	72438	.	+	.	ID=Dca7970.1.exon10;Parent=Dca7970.1