Carnation DB

Dca7990.1

Annotation

7-exons
f-1
sp|D7SIS0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g04560#GO:0000775;GO:0005634;GO:0007067#0F1P2C
sp|D0FYH3_NICTO#Kinetochore protein#Nicotiana tomentosiformis (Tobacco)#Name=NtoMIS12#GO:0000775;GO:0005634;GO:0007067#0F1P2C
Repeat List (scaffold133)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7990.1	1	232	234	57.69	232	57	4e-70
Target_name	Start	End	Length	Cov(%)
sp\|D7SIS0_VITVI	1	241	244	98.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7990.1	1	232	234	41.45	232	41	4e-41
Target_name	Start	End	Length	Cov(%)
AT5G35520.1	1	235	238	98.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold133	Augus-PASA	mRNA	27569	31055	.	+	.	ID=Dca7990.1;Parent=Dca7990
scaffold133	Augus-PASA	exon	27569	27690	.	+	.	ID=Dca7990.1.exon1;Parent=Dca7990.1
scaffold133	Augus-PASA	exon	27788	27845	.	+	.	ID=Dca7990.1.exon2;Parent=Dca7990.1
scaffold133	Augus-PASA	exon	29125	29244	.	+	.	ID=Dca7990.1.exon3;Parent=Dca7990.1
scaffold133	Augus-PASA	exon	29392	29487	.	+	.	ID=Dca7990.1.exon4;Parent=Dca7990.1
scaffold133	Augustus	exon	29576	29714	.	+	.	ID=Dca7990.1.exon5;Parent=Dca7990.1
scaffold133	Augustus	exon	30771	30881	.	+	.	ID=Dca7990.1.exon6;Parent=Dca7990.1
scaffold133	Augustus	exon	30997	31055	.	+	.	ID=Dca7990.1.exon7;Parent=Dca7990.1