Dca8033.1
Annotation
- 4-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1331)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8033.1 |
1 |
81 |
404 |
12.87 |
81 |
65 |
2e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
620 |
700 |
896 |
9.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8033.1 |
201 |
389 |
404 |
15.84 |
189 |
34 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1199 |
1384 |
1401 |
13.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1331 |
Augustus |
mRNA |
28706 |
34279 |
. |
- |
. |
ID=Dca8033.1;Parent=Dca8033 |
| scaffold1331 |
Augustus |
exon |
28706 |
29286 |
. |
- |
. |
ID=Dca8033.1.exon1;Parent=Dca8033.1 |
| scaffold1331 |
Augustus |
exon |
31247 |
31559 |
. |
- |
. |
ID=Dca8033.1.exon2;Parent=Dca8033.1 |
| scaffold1331 |
Augustus |
exon |
33705 |
33793 |
. |
- |
. |
ID=Dca8033.1.exon3;Parent=Dca8033.1 |
| scaffold1331 |
Augustus |
exon |
34048 |
34279 |
. |
- |
. |
ID=Dca8033.1.exon4;Parent=Dca8033.1 |
