Carnation DB

Dca8098.1

Annotation

7-exons
f-1
sp|A9PDJ1_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005622;GO:0008270#1F0P1C
AT1G67180.1 | Symbols: | zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein | chr1:25130099-25132169 FORWARD LENGTH=453
Repeat List (scaffold13353)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8098.1	5	499	500	41.6	495	41	2e-96
Target_name	Start	End	Length	Cov(%)
sp\|A9PDJ1_POPTR	1	478	482	99.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8098.1	5	113	500	14	109	65	4e-38
Target_name	Start	End	Length	Cov(%)
AT1G67180.1	1	109	453	24.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13353	Augustus	mRNA	6784	10484	.	+	.	ID=Dca8098.1;Parent=Dca8098
scaffold13353	Augustus	exon	6784	6918	.	+	.	ID=Dca8098.1.exon1;Parent=Dca8098.1
scaffold13353	Augustus	exon	7406	7539	.	+	.	ID=Dca8098.1.exon2;Parent=Dca8098.1
scaffold13353	Augustus	exon	7896	8076	.	+	.	ID=Dca8098.1.exon3;Parent=Dca8098.1
scaffold13353	Augustus	exon	8290	8418	.	+	.	ID=Dca8098.1.exon4;Parent=Dca8098.1
scaffold13353	Augustus	exon	8605	9180	.	+	.	ID=Dca8098.1.exon5;Parent=Dca8098.1
scaffold13353	Augustus	exon	9580	9759	.	+	.	ID=Dca8098.1.exon6;Parent=Dca8098.1
scaffold13353	Augustus	exon	10317	10484	.	+	.	ID=Dca8098.1.exon7;Parent=Dca8098.1