Carnation DB

Dca8122.1

Annotation

5-exons
f-1
sp|A5B677_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_039558#GO:0016020;GO:0015297;GO:0015238#2F0P1C
Os07t0108200-00 Similar to transparent testa 12 protein.
Repeat List (scaffold1337)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8122.1	6	304	332	52.4	299	49	1e-86
Target_name	Start	End	Length	Cov(%)
sp\|A5B677_VITVI	574	929	1134	31.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8122.1	16	304	332	46.68	289	43	3e-66
Target_name	Start	End	Length	Cov(%)
Os07t0108200-00	41	405	487	74.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1337	Augustus	mRNA	9458	12088	.	+	.	ID=Dca8122.1;Parent=Dca8122
scaffold1337	Augustus	exon	9458	9667	.	+	.	ID=Dca8122.1.exon1;Parent=Dca8122.1
scaffold1337	Augustus	exon	10391	10764	.	+	.	ID=Dca8122.1.exon2;Parent=Dca8122.1
scaffold1337	Augustus	exon	10870	10956	.	+	.	ID=Dca8122.1.exon3;Parent=Dca8122.1
scaffold1337	Augustus	exon	11361	11599	.	+	.	ID=Dca8122.1.exon4;Parent=Dca8122.1
scaffold1337	Augustus	exon	12000	12088	.	+	.	ID=Dca8122.1.exon5;Parent=Dca8122.1