Carnation DB

Dca8123.1

Annotation

7-exons
f-1
sp|B9HZT0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_890616#GO:0016020;GO:0015297;GO:0015238#2F0P1C
AT3G23560.1 | Symbols: ALF5 | MATE efflux family protein | chr3:8454361-8456588 REVERSE LENGTH=477
Repeat List (scaffold1337)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8123.1	35	449	449	62.36	415	68	2e-157
Target_name	Start	End	Length	Cov(%)
sp\|B9HZT0_POPTR	32	444	485	85.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8123.1	3	449	449	58.79	447	59	1e-144
Target_name	Start	End	Length	Cov(%)
AT3G23560.1	1	445	477	93.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1337	Augustus	mRNA	14265	16637	.	+	.	ID=Dca8123.1;Parent=Dca8123
scaffold1337	Augustus	exon	14265	14552	.	+	.	ID=Dca8123.1.exon1;Parent=Dca8123.1
scaffold1337	Augustus	exon	14990	15540	.	+	.	ID=Dca8123.1.exon2;Parent=Dca8123.1
scaffold1337	Augustus	exon	15639	15725	.	+	.	ID=Dca8123.1.exon3;Parent=Dca8123.1
scaffold1337	Augustus	exon	15834	15890	.	+	.	ID=Dca8123.1.exon4;Parent=Dca8123.1
scaffold1337	Augustus	exon	15978	16216	.	+	.	ID=Dca8123.1.exon5;Parent=Dca8123.1
scaffold1337	Augustus	exon	16312	16430	.	+	.	ID=Dca8123.1.exon6;Parent=Dca8123.1
scaffold1337	Augustus	exon	16629	16637	.	+	.	ID=Dca8123.1.exon7;Parent=Dca8123.1