Carnation DB

Dca8199.1

Annotation

8-exons
f-1
sp|F6HNT7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02360#GO:0005737;GO:0004349;GO:0004350;GO:0006561#2F1P1C
sp|Q9XGC4_VITVI#Pyrroline-5-carboxylate synthetase#Vitis vinifera (Grape)#Name=p5cs#GO:0005737;GO:0004349;GO:0004350;GO:0006561#2F1P1C
Repeat List (scaffold13403)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8199.1	1	362	387	73.38	362	79	5e-170
Target_name	Start	End	Length	Cov(%)
sp\|F6HNT7_VITVI	4	365	717	50.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8199.1	1	362	387	71.57	362	77	3e-166
Target_name	Start	End	Length	Cov(%)
Os05t0455500-01	4	365	567	63.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13403	Augustus	mRNA	1513	5310	.	+	.	ID=Dca8199.1;Parent=Dca8199
scaffold13403	Augustus	exon	1513	1563	.	+	.	ID=Dca8199.1.exon1;Parent=Dca8199.1
scaffold13403	Augustus	exon	2603	2674	.	+	.	ID=Dca8199.1.exon2;Parent=Dca8199.1
scaffold13403	Augustus	exon	2760	2863	.	+	.	ID=Dca8199.1.exon3;Parent=Dca8199.1
scaffold13403	Augustus	exon	3925	4027	.	+	.	ID=Dca8199.1.exon4;Parent=Dca8199.1
scaffold13403	Augustus	exon	4113	4274	.	+	.	ID=Dca8199.1.exon5;Parent=Dca8199.1
scaffold13403	Augustus	exon	4426	4703	.	+	.	ID=Dca8199.1.exon6;Parent=Dca8199.1
scaffold13403	Augustus	exon	4824	4974	.	+	.	ID=Dca8199.1.exon7;Parent=Dca8199.1
scaffold13403	Augustus	exon	5068	5310	.	+	.	ID=Dca8199.1.exon8;Parent=Dca8199.1