Carnation DB

Dca8251.1

Annotation

7-exons
f-1
sp|B9HKV7_POPTR#Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial 1#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=GATB1#GO:0016884#1F0P0C
Repeat List (scaffold1344)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8251.1	61	528	528	72.91	468	82	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HKV7_POPTR	33	506	506	93.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8251.1	1	527	528	74.81	527	72	0
Target_name	Start	End	Length	Cov(%)
AT1G48520.1	1	549	550	99.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1344	Augustus	mRNA	53069	58213	.	-	.	ID=Dca8251.1;Parent=Dca8251
scaffold1344	Augustus	exon	53069	53149	.	-	.	ID=Dca8251.1.exon1;Parent=Dca8251.1
scaffold1344	Augustus	exon	53359	53475	.	-	.	ID=Dca8251.1.exon2;Parent=Dca8251.1
scaffold1344	Augustus	exon	54865	55065	.	-	.	ID=Dca8251.1.exon3;Parent=Dca8251.1
scaffold1344	Augustus	exon	55869	56072	.	-	.	ID=Dca8251.1.exon4;Parent=Dca8251.1
scaffold1344	Augustus	exon	56164	56304	.	-	.	ID=Dca8251.1.exon5;Parent=Dca8251.1
scaffold1344	Augustus	exon	56820	57029	.	-	.	ID=Dca8251.1.exon6;Parent=Dca8251.1
scaffold1344	Augustus	exon	57581	58213	.	-	.	ID=Dca8251.1.exon7;Parent=Dca8251.1