Carnation DB

Dca8265.1

Annotation

5-exons
f-1
sp|F6HUL9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g00110#GO:0005524;GO:0004003;GO:0003677;GO:0006289#3F1P0C
sp|B9RCF1_RICCO#Rad25/xp-B DNA repair helicase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1687530#GO:0005524;GO:0004003;GO:0003677;GO:0006289#3F1P0C
Repeat List (scaffold1345)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8265.1	203	325	325	27.69	123	47	8e-34
Target_name	Start	End	Length	Cov(%)
sp\|F6HUL9_VITVI	579	771	771	25.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8265.1	203	324	325	24.61	122	43	3e-25
Target_name	Start	End	Length	Cov(%)
AT5G41360.1	578	765	766	24.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1345	Augustus	mRNA	39532	44571	.	+	.	ID=Dca8265.1;Parent=Dca8265
scaffold1345	Augustus	exon	39532	40140	.	+	.	ID=Dca8265.1.exon1;Parent=Dca8265.1
scaffold1345	Augustus	exon	41979	42092	.	+	.	ID=Dca8265.1.exon2;Parent=Dca8265.1
scaffold1345	Augustus	exon	42558	42603	.	+	.	ID=Dca8265.1.exon3;Parent=Dca8265.1
scaffold1345	Augustus	exon	43944	44061	.	+	.	ID=Dca8265.1.exon4;Parent=Dca8265.1
scaffold1345	Augustus	exon	44481	44571	.	+	.	ID=Dca8265.1.exon5;Parent=Dca8265.1