Carnation DB

Dca8293.1

Annotation

5-exons
f-1
sp|B9SHD2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0529480#unknown#0F0P0C
Repeat List (scaffold13462)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8293.1	12	288	288	73.61	277	74	7e-129
Target_name	Start	End	Length	Cov(%)
sp\|B9SHD2_RICCO	288	575	581	49.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8293.1	11	288	288	70.83	278	70	2e-122
Target_name	Start	End	Length	Cov(%)
AT1G60790.1	246	536	541	53.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13462	Augustus	mRNA	1609	4947	.	-	.	ID=Dca8293.1;Parent=Dca8293
scaffold13462	Augustus	exon	1609	1933	.	-	.	ID=Dca8293.1.exon1;Parent=Dca8293.1
scaffold13462	Augustus	exon	2014	2172	.	-	.	ID=Dca8293.1.exon2;Parent=Dca8293.1
scaffold13462	Augustus	exon	2278	2439	.	-	.	ID=Dca8293.1.exon3;Parent=Dca8293.1
scaffold13462	Augustus	exon	2555	2743	.	-	.	ID=Dca8293.1.exon4;Parent=Dca8293.1
scaffold13462	Augustus	exon	4916	4947	.	-	.	ID=Dca8293.1.exon5;Parent=Dca8293.1