Carnation DB

Dca8297.1

Annotation

5-exons
f-1
sp|B9SY26_RICCO#Dead box ATP-dependent RNA helicase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0436820#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Repeat List (scaffold1347)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8297.1	1	315	338	48.81	315	52	1e-78
Target_name	Start	End	Length	Cov(%)
sp\|B9SY26_RICCO	1	305	493	61.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8297.1	1	312	338	47.63	312	48	3e-66
Target_name	Start	End	Length	Cov(%)
AT2G28600.1	1	307	502	61.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1347	Augus-PASA	mRNA	12801	17233	.	-	.	ID=Dca8297.1;Parent=Dca8297
scaffold1347	Augus-PASA	exon	12801	12962	.	-	.	ID=Dca8297.1.exon1;Parent=Dca8297.1
scaffold1347	Augus-PASA	exon	14339	14438	.	-	.	ID=Dca8297.1.exon2;Parent=Dca8297.1
scaffold1347	Augus-PASA	exon	14853	14941	.	-	.	ID=Dca8297.1.exon3;Parent=Dca8297.1
scaffold1347	Augus-PASA	exon	15362	15874	.	-	.	ID=Dca8297.1.exon4;Parent=Dca8297.1
scaffold1347	Augus-PASA	exon	17081	17233	.	-	.	ID=Dca8297.1.exon5;Parent=Dca8297.1