Carnation DB

Dca8383.1

Annotation

5-exons
f-1
sp|B9HQD3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1088815#unknown#0F0P0C
Repeat List (scaffold1351)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8383.1	19	385	388	44.58	367	47	3e-78
Target_name	Start	End	Length	Cov(%)
sp\|B9HQD3_POPTR	13	367	588	60.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8383.1	23	385	388	41.23	363	40	2e-56
Target_name	Start	End	Length	Cov(%)
AT5G60720.1	71	461	691	56.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1351	Augus-PASA	mRNA	19771	21700	.	-	.	ID=Dca8383.1;Parent=Dca8383
scaffold1351	Augus-PASA	exon	19771	20229	.	-	.	ID=Dca8383.1.exon1;Parent=Dca8383.1
scaffold1351	Augustus	exon	20618	21106	.	-	.	ID=Dca8383.1.exon2;Parent=Dca8383.1
scaffold1351	Augustus	exon	21273	21389	.	-	.	ID=Dca8383.1.exon3;Parent=Dca8383.1
scaffold1351	Augustus	exon	21485	21535	.	-	.	ID=Dca8383.1.exon4;Parent=Dca8383.1
scaffold1351	Augustus	exon	21650	21700	.	-	.	ID=Dca8383.1.exon5;Parent=Dca8383.1