Dca8390.1
Annotation
- 3-exons
- f-1
- sp|B9NDT4_POPTR#Cc-nbs-lrr resistance protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_593533#GO:0043531;GO:0006952#1F1P0C
- Repeat List (scaffold13514)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8390.1 |
25 |
685 |
685 |
29.63 |
661 |
30 |
2e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9NDT4_POPTR |
31 |
647 |
961 |
64.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8390.1 |
38 |
286 |
685 |
14.45 |
249 |
39 |
3e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0693100-01 |
45 |
292 |
521 |
47.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13514 |
Augustus |
mRNA |
564 |
3721 |
. |
- |
. |
ID=Dca8390.1;Parent=Dca8390 |
| scaffold13514 |
Augustus |
exon |
564 |
1765 |
. |
- |
. |
ID=Dca8390.1.exon1;Parent=Dca8390.1 |
| scaffold13514 |
Augustus |
exon |
2585 |
3334 |
. |
- |
. |
ID=Dca8390.1.exon2;Parent=Dca8390.1 |
| scaffold13514 |
Augustus |
exon |
3616 |
3721 |
. |
- |
. |
ID=Dca8390.1.exon3;Parent=Dca8390.1 |
