Carnation DB

Dca8399.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
Repeat List (scaffold1352)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8399.1	126	609	719	31.15	484	40	9e-95
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	185	728	1717	31.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8399.1	383	477	719	4.45	95	34	2e-11
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	191	192	48.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1352	Augustus	mRNA	38169	40929	.	+	.	ID=Dca8399.1;Parent=Dca8399
scaffold1352	Augustus	exon	38169	38174	.	+	.	ID=Dca8399.1.exon1;Parent=Dca8399.1
scaffold1352	Augustus	exon	38238	38595	.	+	.	ID=Dca8399.1.exon2;Parent=Dca8399.1
scaffold1352	Augustus	exon	38926	39161	.	+	.	ID=Dca8399.1.exon3;Parent=Dca8399.1
scaffold1352	Augustus	exon	39271	39576	.	+	.	ID=Dca8399.1.exon4;Parent=Dca8399.1
scaffold1352	Augustus	exon	39676	40929	.	+	.	ID=Dca8399.1.exon5;Parent=Dca8399.1