Carnation DB

Dca84.1

Annotation

10-exons
f-1
sp|D7U7K6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g01790#GO:0000179#1F0P0C
AT1G01860.1 | Symbols: PFC1 | Ribosomal RNA adenine dimethylase family protein | chr1:304439-306275 REVERSE LENGTH=343
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca84.1	4	341	341	67.44	338	69	9e-130
Target_name	Start	End	Length	Cov(%)
sp\|D7U7K6_VITVI	5	335	335	98.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca84.1	33	338	341	63.92	306	72	3e-126
Target_name	Start	End	Length	Cov(%)
AT1G01860.1	36	340	343	88.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augus-PASA	mRNA	782830	786025	.	-	.	ID=Dca84.1;Parent=Dca84
scaffold1	Augus-PASA	exon	782830	782895	.	-	.	ID=Dca84.1.exon1;Parent=Dca84.1
scaffold1	Augus-PASA	exon	782992	783102	.	-	.	ID=Dca84.1.exon2;Parent=Dca84.1
scaffold1	Augus-PASA	exon	783350	783433	.	-	.	ID=Dca84.1.exon3;Parent=Dca84.1
scaffold1	Augus-PASA	exon	783705	783757	.	-	.	ID=Dca84.1.exon4;Parent=Dca84.1
scaffold1	Augus-PASA	exon	783911	783995	.	-	.	ID=Dca84.1.exon5;Parent=Dca84.1
scaffold1	Augus-PASA	exon	784271	784366	.	-	.	ID=Dca84.1.exon6;Parent=Dca84.1
scaffold1	Augus-PASA	exon	784680	784778	.	-	.	ID=Dca84.1.exon7;Parent=Dca84.1
scaffold1	Augus-PASA	exon	784898	784954	.	-	.	ID=Dca84.1.exon8;Parent=Dca84.1
scaffold1	Augus-PASA	exon	785506	785655	.	-	.	ID=Dca84.1.exon9;Parent=Dca84.1
scaffold1	Augus-PASA	exon	785801	786025	.	-	.	ID=Dca84.1.exon10;Parent=Dca84.1