Dca8415.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1353)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8415.1 |
1 |
762 |
823 |
45.44 |
762 |
48 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
26 |
750 |
1717 |
42.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8415.1 |
519 |
630 |
823 |
5.1 |
112 |
35 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
69 |
189 |
192 |
63.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1353 |
Augustus |
mRNA |
78463 |
81179 |
. |
+ |
. |
ID=Dca8415.1;Parent=Dca8415 |
| scaffold1353 |
Augustus |
exon |
78463 |
80530 |
. |
+ |
. |
ID=Dca8415.1.exon1;Parent=Dca8415.1 |
| scaffold1353 |
Augustus |
exon |
80602 |
80835 |
. |
+ |
. |
ID=Dca8415.1.exon2;Parent=Dca8415.1 |
| scaffold1353 |
Augustus |
exon |
80914 |
80991 |
. |
+ |
. |
ID=Dca8415.1.exon3;Parent=Dca8415.1 |
| scaffold1353 |
Augustus |
exon |
81088 |
81179 |
. |
+ |
. |
ID=Dca8415.1.exon4;Parent=Dca8415.1 |
