Carnation DB

Dca8527.1

Annotation

8-exons
f-1
sp|G5DWJ6_SILLA#Protein TRF-like protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold136)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8527.1	102	569	584	53.76	468	67	2e-164
Target_name	Start	End	Length	Cov(%)
sp\|G5DWJ6_SILLA	7	463	463	98.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8527.1	150	569	584	31.5	420	43	2e-80
Target_name	Start	End	Length	Cov(%)
AT1G72650.2	226	630	630	64.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold136	Augustus	mRNA	85773	89690	.	-	.	ID=Dca8527.1;Parent=Dca8527
scaffold136	Augustus	exon	85773	85904	.	-	.	ID=Dca8527.1.exon1;Parent=Dca8527.1
scaffold136	Augustus	exon	86157	86213	.	-	.	ID=Dca8527.1.exon2;Parent=Dca8527.1
scaffold136	Augustus	exon	86414	86740	.	-	.	ID=Dca8527.1.exon3;Parent=Dca8527.1
scaffold136	Augustus	exon	87227	87355	.	-	.	ID=Dca8527.1.exon4;Parent=Dca8527.1
scaffold136	Augustus	exon	87530	88291	.	-	.	ID=Dca8527.1.exon5;Parent=Dca8527.1
scaffold136	Augustus	exon	88465	88523	.	-	.	ID=Dca8527.1.exon6;Parent=Dca8527.1
scaffold136	Augustus	exon	88728	88893	.	-	.	ID=Dca8527.1.exon7;Parent=Dca8527.1
scaffold136	Augustus	exon	89568	89690	.	-	.	ID=Dca8527.1.exon8;Parent=Dca8527.1