Carnation DB

Dca8542.1

Annotation

5-exons
f-1
sp|G7JY21_MEDTR#Ribosome maturation factor rimP#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g045020#unknown#0F0P0C
Repeat List (scaffold136)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8542.1	38	306	307	48.2	269	55	8e-73
Target_name	Start	End	Length	Cov(%)
sp\|G7JY21_MEDTR	30	282	282	89.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8542.1	120	306	307	37.13	187	61	2e-64
Target_name	Start	End	Length	Cov(%)
AT1G69210.1	121	305	305	60.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold136	Augus-PASA	mRNA	234741	237429	.	-	.	ID=Dca8542.1;Parent=Dca8542
scaffold136	Augus-PASA	exon	234741	235049	.	-	.	ID=Dca8542.1.exon1;Parent=Dca8542.1
scaffold136	Augus-PASA	exon	235135	235243	.	-	.	ID=Dca8542.1.exon2;Parent=Dca8542.1
scaffold136	Augus-PASA	exon	235589	235764	.	-	.	ID=Dca8542.1.exon3;Parent=Dca8542.1
scaffold136	Augus-PASA	exon	235922	235977	.	-	.	ID=Dca8542.1.exon4;Parent=Dca8542.1
scaffold136	Augus-PASA	exon	237156	237429	.	-	.	ID=Dca8542.1.exon5;Parent=Dca8542.1