Carnation DB

Dca8550.1

Annotation

6-exons
f-1
sp|B9S2Z0_RICCO#Porphobilinogen deaminase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1534040#GO:0004418;GO:0018160;GO:0033014#1F2P0C
Repeat List (scaffold1360)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8550.1	44	369	389	69.92	326	84	7e-162
Target_name	Start	End	Length	Cov(%)
sp\|B9S2Z0_RICCO	46	371	372	87.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8550.1	46	368	389	64.78	323	79	3e-147
Target_name	Start	End	Length	Cov(%)
AT5G08280.1	61	380	382	83.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1360	Augustus	mRNA	38493	44593	.	-	.	ID=Dca8550.1;Parent=Dca8550
scaffold1360	Augustus	exon	38493	38550	.	-	.	ID=Dca8550.1.exon1;Parent=Dca8550.1
scaffold1360	Augustus	exon	41234	41345	.	-	.	ID=Dca8550.1.exon2;Parent=Dca8550.1
scaffold1360	Augustus	exon	41439	41616	.	-	.	ID=Dca8550.1.exon3;Parent=Dca8550.1
scaffold1360	Augus-PASA	exon	42086	42292	.	-	.	ID=Dca8550.1.exon4;Parent=Dca8550.1
scaffold1360	Augus-PASA	exon	42682	43087	.	-	.	ID=Dca8550.1.exon5;Parent=Dca8550.1
scaffold1360	Augus-PASA	exon	44385	44593	.	-	.	ID=Dca8550.1.exon6;Parent=Dca8550.1