Dca8572.1
Annotation
- 3-exons
- f-1
- sp|A5B385_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040647#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1362)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8572.1 |
1 |
312 |
323 |
58.2 |
312 |
61 |
7e-109
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B385_VITVI |
1003 |
1312 |
1795 |
17.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8572.1 |
6 |
272 |
323 |
26.93 |
267 |
33 |
5e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
65 |
331 |
591 |
45.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1362 |
Augustus |
mRNA |
452 |
3729 |
. |
+ |
. |
ID=Dca8572.1;Parent=Dca8572 |
| scaffold1362 |
Augustus |
exon |
452 |
1306 |
. |
+ |
. |
ID=Dca8572.1.exon1;Parent=Dca8572.1 |
| scaffold1362 |
Augustus |
exon |
2059 |
2133 |
. |
+ |
. |
ID=Dca8572.1.exon2;Parent=Dca8572.1 |
| scaffold1362 |
Augustus |
exon |
3690 |
3729 |
. |
+ |
. |
ID=Dca8572.1.exon3;Parent=Dca8572.1 |
