Carnation DB

Dca8643.1

Annotation

12-exons
f-1
sp|A5AJE8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_019065#GO:0016779#1F0P0C
AT2G32260.1 | Symbols: ATCCT1, CCT1 | phosphorylcholine cytidylyltransferase | chr2:13697645-13700241 FORWARD LENGTH=332
Repeat List (scaffold1367)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8643.1	23	164	469	26.43	142	88	8e-72
Target_name	Start	End	Length	Cov(%)
sp\|A5AJE8_VITVI	33	174	331	42.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8643.1	20	184	469	29.21	165	83	2e-77
Target_name	Start	End	Length	Cov(%)
AT2G32260.1	29	195	332	50.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1367	Augustus	mRNA	31118	36294	.	-	.	ID=Dca8643.1;Parent=Dca8643
scaffold1367	Augustus	exon	31118	31390	.	-	.	ID=Dca8643.1.exon1;Parent=Dca8643.1
scaffold1367	Augustus	exon	31502	31612	.	-	.	ID=Dca8643.1.exon2;Parent=Dca8643.1
scaffold1367	Augustus	exon	32574	32642	.	-	.	ID=Dca8643.1.exon3;Parent=Dca8643.1
scaffold1367	Augustus	exon	32759	32914	.	-	.	ID=Dca8643.1.exon4;Parent=Dca8643.1
scaffold1367	Augustus	exon	33003	33045	.	-	.	ID=Dca8643.1.exon5;Parent=Dca8643.1
scaffold1367	Augustus	exon	33266	33361	.	-	.	ID=Dca8643.1.exon6;Parent=Dca8643.1
scaffold1367	Augustus	exon	33916	34029	.	-	.	ID=Dca8643.1.exon7;Parent=Dca8643.1
scaffold1367	Augustus	exon	34385	34527	.	-	.	ID=Dca8643.1.exon8;Parent=Dca8643.1
scaffold1367	Augustus	exon	34616	34658	.	-	.	ID=Dca8643.1.exon9;Parent=Dca8643.1
scaffold1367	Augustus	exon	34879	34974	.	-	.	ID=Dca8643.1.exon10;Parent=Dca8643.1
scaffold1367	Augustus	exon	35529	35642	.	-	.	ID=Dca8643.1.exon11;Parent=Dca8643.1
scaffold1367	Augustus	exon	36143	36294	.	-	.	ID=Dca8643.1.exon12;Parent=Dca8643.1