Carnation DB

Dca8670.1

Annotation

7-exons
f-1
sp|D7TFE1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0087g00460#GO:0003676;GO:0000166;GO:0016706;GO:0005089#4F0P0C
AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleotide exchange factor 14 | chr1:11326474-11329767 REVERSE LENGTH=576
Repeat List (scaffold1369)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8670.1	1	561	577	59.27	561	60	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TFE1_VITVI	2	554	912	60.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8670.1	1	564	577	51.99	564	51	8e-161
Target_name	Start	End	Length	Cov(%)
AT1G31650.1	2	569	576	98.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1369	Augustus	mRNA	3908	11205	.	-	.	ID=Dca8670.1;Parent=Dca8670
scaffold1369	Augustus	exon	3908	4306	.	-	.	ID=Dca8670.1.exon1;Parent=Dca8670.1
scaffold1369	Augustus	exon	4423	4773	.	-	.	ID=Dca8670.1.exon2;Parent=Dca8670.1
scaffold1369	Augustus	exon	4858	5130	.	-	.	ID=Dca8670.1.exon3;Parent=Dca8670.1
scaffold1369	Augustus	exon	5366	5440	.	-	.	ID=Dca8670.1.exon4;Parent=Dca8670.1
scaffold1369	Augustus	exon	5540	5720	.	-	.	ID=Dca8670.1.exon5;Parent=Dca8670.1
scaffold1369	Augustus	exon	5882	6260	.	-	.	ID=Dca8670.1.exon6;Parent=Dca8670.1
scaffold1369	Augustus	exon	11130	11205	.	-	.	ID=Dca8670.1.exon7;Parent=Dca8670.1