Carnation DB

Dca8683.1

Annotation

5-exons
f-1
sp|B9I3R1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_773181#unknown#0F0P0C
Os08t0531200-01 WD40 repeat domain containing protein.
Repeat List (scaffold137)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8683.1	19	234	240	42.5	216	46	7e-46
Target_name	Start	End	Length	Cov(%)
sp\|B9I3R1_POPTR	31	251	253	87.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8683.1	19	225	240	36.66	207	42	2e-41
Target_name	Start	End	Length	Cov(%)
AT5G50410.1	37	248	259	81.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold137	Augustus	mRNA	31267	33957	.	+	.	ID=Dca8683.1;Parent=Dca8683
scaffold137	Augustus	exon	31267	31509	.	+	.	ID=Dca8683.1.exon1;Parent=Dca8683.1
scaffold137	Augustus	exon	32020	32262	.	+	.	ID=Dca8683.1.exon2;Parent=Dca8683.1
scaffold137	Augustus	exon	32372	32453	.	+	.	ID=Dca8683.1.exon3;Parent=Dca8683.1
scaffold137	Augustus	exon	33669	33747	.	+	.	ID=Dca8683.1.exon4;Parent=Dca8683.1
scaffold137	Augustus	exon	33882	33957	.	+	.	ID=Dca8683.1.exon5;Parent=Dca8683.1