Dca8784.1
Annotation
- 2-exons
- f-1
- sp|Q53JB7_ORYSJ#Retrotransposon gag protein, putative#Oryza sativa subsp japonica (Rice)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold13744)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8784.1 |
1 |
152 |
152 |
63.15 |
152 |
54 |
9e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53JB7_ORYSJ |
918 |
1095 |
1739 |
10.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8784.1 |
71 |
151 |
152 |
21.71 |
81 |
41 |
7e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
214 |
292 |
707 |
11.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13744 |
Augustus |
mRNA |
6035 |
6576 |
. |
- |
. |
ID=Dca8784.1;Parent=Dca8784 |
| scaffold13744 |
Augustus |
exon |
6035 |
6324 |
. |
- |
. |
ID=Dca8784.1.exon1;Parent=Dca8784.1 |
| scaffold13744 |
Augustus |
exon |
6408 |
6576 |
. |
- |
. |
ID=Dca8784.1.exon2;Parent=Dca8784.1 |
