Carnation DB

Dca8826.1

Annotation

8-exons
f-1
sp|B9RIA4_RICCO#Copper-transporting atpase p-type, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1577390#GO:0016021;GO:0005524;GO:0005507;GO:0004008;GO:0006754#3F1P1C
Repeat List (scaffold1377)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8826.1	6	963	975	71.48	958	73	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RIA4_RICCO	7	967	968	99.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8826.1	1	973	975	69.02	973	69	0
Target_name	Start	End	Length	Cov(%)
Os02t0196600-01	1	976	979	99.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1377	Augustus	mRNA	25852	30503	.	+	.	ID=Dca8826.1;Parent=Dca8826
scaffold1377	Augustus	exon	25852	26103	.	+	.	ID=Dca8826.1.exon1;Parent=Dca8826.1
scaffold1377	Augustus	exon	26308	27053	.	+	.	ID=Dca8826.1.exon2;Parent=Dca8826.1
scaffold1377	Augustus	exon	27158	27629	.	+	.	ID=Dca8826.1.exon3;Parent=Dca8826.1
scaffold1377	Augustus	exon	27780	27947	.	+	.	ID=Dca8826.1.exon4;Parent=Dca8826.1
scaffold1377	Augustus	exon	28320	28574	.	+	.	ID=Dca8826.1.exon5;Parent=Dca8826.1
scaffold1377	Augustus	exon	29128	29250	.	+	.	ID=Dca8826.1.exon6;Parent=Dca8826.1
scaffold1377	Augustus	exon	29393	29878	.	+	.	ID=Dca8826.1.exon7;Parent=Dca8826.1
scaffold1377	Augustus	exon	30078	30503	.	+	.	ID=Dca8826.1.exon8;Parent=Dca8826.1