Carnation DB

Dca8886.1

Annotation

5-exons
f-1
sp|B9HSN9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_805439#GO:0005509;GO:0004435;GO:0004871;GO:0035556;GO:0006629#3F2P0C
Repeat List (scaffold138)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8886.1	30	113	113	41.59	84	45	4e-14
Target_name	Start	End	Length	Cov(%)
sp\|B9HSN9_POPTR	474	570	571	16.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8886.1	19	113	113	43.36	95	43	3e-15
Target_name	Start	End	Length	Cov(%)
AT2G40116.1	507	612	613	17.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold138	Augustus	mRNA	25864	27939	.	+	.	ID=Dca8886.1;Parent=Dca8886
scaffold138	Augustus	exon	25864	25903	.	+	.	ID=Dca8886.1.exon1;Parent=Dca8886.1
scaffold138	Augustus	exon	25984	26033	.	+	.	ID=Dca8886.1.exon2;Parent=Dca8886.1
scaffold138	Augustus	exon	26526	26591	.	+	.	ID=Dca8886.1.exon3;Parent=Dca8886.1
scaffold138	Augustus	exon	26655	26827	.	+	.	ID=Dca8886.1.exon4;Parent=Dca8886.1
scaffold138	Augustus	exon	27927	27939	.	+	.	ID=Dca8886.1.exon5;Parent=Dca8886.1