Carnation DB

Dca8911.1

Annotation

5-exons
f-1
sp|B9H0P2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_712930#unknown#0F0P0C
AT1G11755.1 | Symbols: LEW1 | Undecaprenyl pyrophosphate synthetase family protein | chr1:3969987-3971488 REVERSE LENGTH=254
Repeat List (scaffold138)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8911.1	1	218	218	57.33	218	56	3e-64
Target_name	Start	End	Length	Cov(%)
sp\|B9H0P2_POPTR	1	226	254	88.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8911.1	12	218	218	44.49	207	46	8e-47
Target_name	Start	End	Length	Cov(%)
AT1G11755.1	13	225	254	83.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold138	Augustus	mRNA	283631	285455	.	+	.	ID=Dca8911.1;Parent=Dca8911
scaffold138	Augustus	exon	283631	283675	.	+	.	ID=Dca8911.1.exon1;Parent=Dca8911.1
scaffold138	Augustus	exon	284540	284810	.	+	.	ID=Dca8911.1.exon2;Parent=Dca8911.1
scaffold138	Augustus	exon	284911	284969	.	+	.	ID=Dca8911.1.exon3;Parent=Dca8911.1
scaffold138	Augustus	exon	285074	285254	.	+	.	ID=Dca8911.1.exon4;Parent=Dca8911.1
scaffold138	Augustus	exon	285355	285455	.	+	.	ID=Dca8911.1.exon5;Parent=Dca8911.1