Carnation DB

Dca8930.1

Annotation

5-exons
f-1
sp|B9EYX5_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_03086#GO:0005524;GO:0004003;GO:0003677;GO:0006289#3F1P0C
Os01t0691600-01 Similar to DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3 homolog 2) (RAD25 homolog 2) (AtXPB2).
Repeat List (scaffold138)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8930.1	39	217	261	52.87	179	78	4e-76
Target_name	Start	End	Length	Cov(%)
sp\|B9EYX5_ORYSJ	46	224	766	23.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8930.1	39	217	261	52.87	179	78	4e-77
Target_name	Start	End	Length	Cov(%)
Os01t0691600-01	46	224	581	30.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold138	Augustus	mRNA	416920	419797	.	+	.	ID=Dca8930.1;Parent=Dca8930
scaffold138	Augustus	exon	416920	417031	.	+	.	ID=Dca8930.1.exon1;Parent=Dca8930.1
scaffold138	Augustus	exon	418826	418988	.	+	.	ID=Dca8930.1.exon2;Parent=Dca8930.1
scaffold138	Augustus	exon	419085	419307	.	+	.	ID=Dca8930.1.exon3;Parent=Dca8930.1
scaffold138	Augustus	exon	419369	419425	.	+	.	ID=Dca8930.1.exon4;Parent=Dca8930.1
scaffold138	Augustus	exon	419567	419797	.	+	.	ID=Dca8930.1.exon5;Parent=Dca8930.1