Dca8999.1
Annotation
- 2-exons
- f-1
- sp|B9GPH4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_409907#unknown#0F0P0C
- Os03t0246900-00 Similar to LOB domain protein 16.
- Repeat List (scaffold13839)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8999.1 |
30 |
231 |
232 |
65.08 |
202 |
75 |
3e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GPH4_POPTR |
20 |
212 |
217 |
88.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8999.1 |
30 |
232 |
232 |
59.05 |
203 |
61 |
1e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0246900-00 |
37 |
262 |
276 |
81.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13839 |
Augustus |
mRNA |
580 |
4522 |
. |
+ |
. |
ID=Dca8999.1;Parent=Dca8999 |
| scaffold13839 |
Augustus |
exon |
580 |
927 |
. |
+ |
. |
ID=Dca8999.1.exon1;Parent=Dca8999.1 |
| scaffold13839 |
Augustus |
exon |
4172 |
4522 |
. |
+ |
. |
ID=Dca8999.1.exon2;Parent=Dca8999.1 |
