Carnation DB

Dca9035.1

Annotation

5-exons
f-1
sp|A0SVL7_POPCN#LIM domain protein WLIM2a#Populus canescens (Grey poplar) (Populus tremula x Populus alba)#Name=WLIM2a#GO:0008270#1F0P0C
Repeat List (scaffold1386)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9035.1	1	192	205	72.19	192	78	5e-85
Target_name	Start	End	Length	Cov(%)
sp\|A0SVL7_POPCN	1	189	189	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9035.1	1	184	205	65.36	184	73	3e-79
Target_name	Start	End	Length	Cov(%)
AT2G39900.1	1	182	200	91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1386	Augus-PASA	mRNA	8872	10637	.	-	.	ID=Dca9035.1;Parent=Dca9035
scaffold1386	Augus-PASA	exon	8872	9120	.	-	.	ID=Dca9035.1.exon1;Parent=Dca9035.1
scaffold1386	Augus-PASA	exon	9233	9322	.	-	.	ID=Dca9035.1.exon2;Parent=Dca9035.1
scaffold1386	Augus-PASA	exon	9429	9472	.	-	.	ID=Dca9035.1.exon3;Parent=Dca9035.1
scaffold1386	Augus-PASA	exon	9573	9672	.	-	.	ID=Dca9035.1.exon4;Parent=Dca9035.1
scaffold1386	Augustus	exon	10503	10637	.	-	.	ID=Dca9035.1.exon5;Parent=Dca9035.1