Carnation DB

Dca9113.1

Annotation

8-exons
f-1
sp|B9RHH0_RICCO#Arginine/serine rich splicing factor sf4/14, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1526370#GO:0005622;GO:0003723;GO:0006396#1F1P1C
Repeat List (scaffold139)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9113.1	1	422	422	65.4	422	63	6e-148
Target_name	Start	End	Length	Cov(%)
sp\|B9RHH0_RICCO	1	441	441	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9113.1	1	422	422	62.08	422	59	2e-136
Target_name	Start	End	Length	Cov(%)
AT3G52120.1	1	443	443	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold139	Augustus	mRNA	86308	90675	.	+	.	ID=Dca9113.1;Parent=Dca9113
scaffold139	Augustus	exon	86308	86707	.	+	.	ID=Dca9113.1.exon1;Parent=Dca9113.1
scaffold139	Augus-PASA	exon	87087	87213	.	+	.	ID=Dca9113.1.exon2;Parent=Dca9113.1
scaffold139	Augus-PASA	exon	87980	88086	.	+	.	ID=Dca9113.1.exon3;Parent=Dca9113.1
scaffold139	Augus-PASA	exon	88526	88657	.	+	.	ID=Dca9113.1.exon4;Parent=Dca9113.1
scaffold139	Augus-PASA	exon	89076	89192	.	+	.	ID=Dca9113.1.exon5;Parent=Dca9113.1
scaffold139	Augus-PASA	exon	89377	89556	.	+	.	ID=Dca9113.1.exon6;Parent=Dca9113.1
scaffold139	Augus-PASA	exon	90117	90295	.	+	.	ID=Dca9113.1.exon7;Parent=Dca9113.1
scaffold139	Augus-PASA	exon	90649	90675	.	+	.	ID=Dca9113.1.exon8;Parent=Dca9113.1