Carnation DB

Dca9128.1

Annotation

5-exons
f-1
sp|A5ARV9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010143#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold139)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9128.1	60	1392	1419	37.27	1333	38	0
Target_name	Start	End	Length	Cov(%)
sp\|A5ARV9_VITVI	68	1361	1523	84.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9128.1	431	1393	1419	21.7	963	32	7e-128
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	377	1283	1401	64.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold139	Augustus	mRNA	171583	177734	.	+	.	ID=Dca9128.1;Parent=Dca9128
scaffold139	Augustus	exon	171583	171643	.	+	.	ID=Dca9128.1.exon1;Parent=Dca9128.1
scaffold139	Augustus	exon	171877	171990	.	+	.	ID=Dca9128.1.exon2;Parent=Dca9128.1
scaffold139	Augustus	exon	173473	175905	.	+	.	ID=Dca9128.1.exon3;Parent=Dca9128.1
scaffold139	Augustus	exon	175993	176393	.	+	.	ID=Dca9128.1.exon4;Parent=Dca9128.1
scaffold139	Augustus	exon	176484	177734	.	+	.	ID=Dca9128.1.exon5;Parent=Dca9128.1