Carnation DB

Dca9131.1

Annotation

5-exons
f-1
sp|F8WLB4_CITUN#Mechanosensitive ion channel domain-containing protein#Citrus unshiu (Satsuma mandarin) (Citrus nobilis var unshiu)#Name=ORF47#GO:0016020;GO:0055085#0F1P1C
Repeat List (scaffold139)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9131.1	566	775	826	9.8	210	38	5e-31
Target_name	Start	End	Length	Cov(%)
sp\|F8WLB4_CITUN	427	632	694	29.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9131.1	188	316	826	4.72	129	30	1e-06
Target_name	Start	End	Length	Cov(%)
AT5G12080.1	198	305	734	14.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold139	Augustus	mRNA	222618	225792	.	-	.	ID=Dca9131.1;Parent=Dca9131
scaffold139	Augustus	exon	222618	222855	.	-	.	ID=Dca9131.1.exon1;Parent=Dca9131.1
scaffold139	Augustus	exon	223031	223242	.	-	.	ID=Dca9131.1.exon2;Parent=Dca9131.1
scaffold139	Augustus	exon	223346	223639	.	-	.	ID=Dca9131.1.exon3;Parent=Dca9131.1
scaffold139	Augustus	exon	223773	223929	.	-	.	ID=Dca9131.1.exon4;Parent=Dca9131.1
scaffold139	Augustus	exon	224213	225792	.	-	.	ID=Dca9131.1.exon5;Parent=Dca9131.1