Carnation DB

Dca9172.1

Annotation

10-exons
f-3
sp|D7TEC1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g01130#GO:0005524;GO:0004674;GO:0016998#2F1P0C
sp|B9SH40_RICCO#Receptor protein kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1115620#GO:0005524;GO:0004715;GO:0004674;GO:0004872#4F0P0C
Repeat List (scaffold13918)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9172.1	1	527	527	60.34	527	56	2e-179
Target_name	Start	End	Length	Cov(%)
sp\|D7TEC1_VITVI	53	625	625	91.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9172.1	4	527	527	57.3	524	55	2e-164
Target_name	Start	End	Length	Cov(%)
AT3G21630.1	66	617	617	89.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13918	Augustus	mRNA	1351	5277	.	+	.	ID=Dca9172.1;Parent=Dca9172
scaffold13918	Augustus	exon	1351	1806	.	+	.	ID=Dca9172.1.exon1;Parent=Dca9172.1
scaffold13918	Augustus	exon	2796	2939	.	+	.	ID=Dca9172.1.exon2;Parent=Dca9172.1
scaffold13918	Augustus	exon	3469	3629	.	+	.	ID=Dca9172.1.exon3;Parent=Dca9172.1
scaffold13918	Augustus	exon	3755	3844	.	+	.	ID=Dca9172.1.exon4;Parent=Dca9172.1
scaffold13918	Augustus	exon	3938	4031	.	+	.	ID=Dca9172.1.exon5;Parent=Dca9172.1
scaffold13918	Augustus	exon	4143	4294	.	+	.	ID=Dca9172.1.exon6;Parent=Dca9172.1
scaffold13918	Augustus	exon	4380	4471	.	+	.	ID=Dca9172.1.exon7;Parent=Dca9172.1
scaffold13918	Augustus	exon	4693	4831	.	+	.	ID=Dca9172.1.exon8;Parent=Dca9172.1
scaffold13918	Augustus	exon	4926	5021	.	+	.	ID=Dca9172.1.exon9;Parent=Dca9172.1
scaffold13918	Augustus	exon	5116	5277	.	+	.	ID=Dca9172.1.exon10;Parent=Dca9172.1