Carnation DB

Dca9177.1

Annotation

6-exons
f-1
sp|B9IA16_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_774885#unknown#0F0P0C
AT2G48120.1 | Symbols: PAC | pale cress protein (PAC) | chr2:19679870-19681351 FORWARD LENGTH=313
Repeat List (scaffold1392)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9177.1	10	243	251	62.54	234	68	2e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9IA16_POPTR	12	238	313	72.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9177.1	56	239	251	56.97	184	78	3e-63
Target_name	Start	End	Length	Cov(%)
AT2G48120.1	48	231	313	58.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1392	Augustus	mRNA	44507	47113	.	-	.	ID=Dca9177.1;Parent=Dca9177
scaffold1392	Augustus	exon	44507	44722	.	-	.	ID=Dca9177.1.exon1;Parent=Dca9177.1
scaffold1392	Augustus	exon	44797	44847	.	-	.	ID=Dca9177.1.exon2;Parent=Dca9177.1
scaffold1392	Augustus	exon	45576	45662	.	-	.	ID=Dca9177.1.exon3;Parent=Dca9177.1
scaffold1392	Augustus	exon	45764	45958	.	-	.	ID=Dca9177.1.exon4;Parent=Dca9177.1
scaffold1392	Augustus	exon	46788	46873	.	-	.	ID=Dca9177.1.exon5;Parent=Dca9177.1
scaffold1392	Augustus	exon	46993	47113	.	-	.	ID=Dca9177.1.exon6;Parent=Dca9177.1