Carnation DB

Dca9252.1

Annotation

7-exons
f-1
sp|F6HL19_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g01380#GO:0005089#1F0P0C
AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | RHO guanyl-nucleotide exchange factor 7 | chr5:383493-385698 FORWARD LENGTH=546
Repeat List (scaffold1397)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9252.1	94	574	587	59.79	481	73	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HL19_VITVI	101	582	609	79.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9252.1	31	547	587	56.55	517	64	0
Target_name	Start	End	Length	Cov(%)
AT5G02010.1	6	503	546	91.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1397	Augustus	mRNA	18341	21505	.	-	.	ID=Dca9252.1;Parent=Dca9252
scaffold1397	Augustus	exon	18341	18805	.	-	.	ID=Dca9252.1.exon1;Parent=Dca9252.1
scaffold1397	Augustus	exon	18906	19259	.	-	.	ID=Dca9252.1.exon2;Parent=Dca9252.1
scaffold1397	Augustus	exon	19386	19676	.	-	.	ID=Dca9252.1.exon3;Parent=Dca9252.1
scaffold1397	Augustus	exon	19760	19834	.	-	.	ID=Dca9252.1.exon4;Parent=Dca9252.1
scaffold1397	Augustus	exon	20385	20539	.	-	.	ID=Dca9252.1.exon5;Parent=Dca9252.1
scaffold1397	Augustus	exon	20946	21062	.	-	.	ID=Dca9252.1.exon6;Parent=Dca9252.1
scaffold1397	Augustus	exon	21199	21505	.	-	.	ID=Dca9252.1.exon7;Parent=Dca9252.1