Carnation DB

Dca9297.1

Annotation

8-exons
f-1
sp|B7FI23_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#unknown#GO:0019898;GO:0009654;GO:0005509;GO:0015979#1F1P2C
AT2G39470.1 | Symbols: PPL2 | PsbP-like protein 2 | chr2:16476335-16477653 FORWARD LENGTH=238
Repeat List (scaffold14)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9297.1	6	227	227	56.38	222	58	5e-69
Target_name	Start	End	Length	Cov(%)
sp\|B7FI23_MEDTR	15	234	234	94.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9297.1	45	227	227	48.01	183	60	1e-63
Target_name	Start	End	Length	Cov(%)
AT2G39470.1	56	238	238	76.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14	Augus-PASA	mRNA	22383	24120	.	+	.	ID=Dca9297.1;Parent=Dca9297
scaffold14	Augus-PASA	exon	22383	22439	.	+	.	ID=Dca9297.1.exon1;Parent=Dca9297.1
scaffold14	Augus-PASA	exon	22621	22693	.	+	.	ID=Dca9297.1.exon2;Parent=Dca9297.1
scaffold14	Augus-PASA	exon	23045	23128	.	+	.	ID=Dca9297.1.exon3;Parent=Dca9297.1
scaffold14	Augus-PASA	exon	23250	23323	.	+	.	ID=Dca9297.1.exon4;Parent=Dca9297.1
scaffold14	Augus-PASA	exon	23410	23532	.	+	.	ID=Dca9297.1.exon5;Parent=Dca9297.1
scaffold14	Augus-PASA	exon	23646	23717	.	+	.	ID=Dca9297.1.exon6;Parent=Dca9297.1
scaffold14	Augus-PASA	exon	23811	23907	.	+	.	ID=Dca9297.1.exon7;Parent=Dca9297.1
scaffold14	Augus-PASA	exon	24017	24120	.	+	.	ID=Dca9297.1.exon8;Parent=Dca9297.1