Carnation DB

Dca9298.1

Annotation

12-exons
f-1
sp|B9HTN2_POPTR#Multidrug/pheromone exporter, MDR family, ABC transporter family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_833831#GO:0016021;GO:0005524;GO:0042626#2F0P1C
Repeat List (scaffold14)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9298.1	1	1447	1447	83.89	1447	84	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HTN2_POPTR	1	1397	1397	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9298.1	1	1447	1447	82.17	1447	82	0
Target_name	Start	End	Length	Cov(%)
AT3G55320.1	1	1408	1408	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14	Augustus	mRNA	28181	37822	.	+	.	ID=Dca9298.1;Parent=Dca9298
scaffold14	Augustus	exon	28181	28573	.	+	.	ID=Dca9298.1.exon1;Parent=Dca9298.1
scaffold14	Augustus	exon	30009	30063	.	+	.	ID=Dca9298.1.exon2;Parent=Dca9298.1
scaffold14	Augustus	exon	30146	30321	.	+	.	ID=Dca9298.1.exon3;Parent=Dca9298.1
scaffold14	Augustus	exon	30413	30613	.	+	.	ID=Dca9298.1.exon4;Parent=Dca9298.1
scaffold14	Augustus	exon	32480	32739	.	+	.	ID=Dca9298.1.exon5;Parent=Dca9298.1
scaffold14	Augustus	exon	32837	33147	.	+	.	ID=Dca9298.1.exon6;Parent=Dca9298.1
scaffold14	Augus-PASA	exon	33589	33809	.	+	.	ID=Dca9298.1.exon7;Parent=Dca9298.1
scaffold14	Augustus	exon	33970	34310	.	+	.	ID=Dca9298.1.exon8;Parent=Dca9298.1
scaffold14	Augustus	exon	34470	35269	.	+	.	ID=Dca9298.1.exon9;Parent=Dca9298.1
scaffold14	Augustus	exon	35375	35616	.	+	.	ID=Dca9298.1.exon10;Parent=Dca9298.1
scaffold14	Augustus	exon	35921	36034	.	+	.	ID=Dca9298.1.exon11;Parent=Dca9298.1
scaffold14	Augustus	exon	36593	37822	.	+	.	ID=Dca9298.1.exon12;Parent=Dca9298.1