Carnation DB

Dca9368.1

Annotation

7-exons
f-1
sp|D7KSG5_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_315605#unknown#0F0P0C
Os05t0594900-01 Similar to U6 snRNA-associated Sm-like protein LSm8.
Repeat List (scaffold140)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9368.1	26	149	149	59.73	124	72	3e-44
Target_name	Start	End	Length	Cov(%)
sp\|D7KSG5_ARALL	467	590	590	21.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9368.1	51	149	149	53.69	99	81	8e-42
Target_name	Start	End	Length	Cov(%)
Os05t0594900-01	1	99	100	99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold140	Augustus	mRNA	57574	63998	.	-	.	ID=Dca9368.1;Parent=Dca9368
scaffold140	Augustus	exon	57574	57664	.	-	.	ID=Dca9368.1.exon1;Parent=Dca9368.1
scaffold140	Augustus	exon	57830	57882	.	-	.	ID=Dca9368.1.exon2;Parent=Dca9368.1
scaffold140	Augustus	exon	59590	59664	.	-	.	ID=Dca9368.1.exon3;Parent=Dca9368.1
scaffold140	Augustus	exon	59782	59822	.	-	.	ID=Dca9368.1.exon4;Parent=Dca9368.1
scaffold140	Augustus	exon	60037	60108	.	-	.	ID=Dca9368.1.exon5;Parent=Dca9368.1
scaffold140	Augustus	exon	62674	62777	.	-	.	ID=Dca9368.1.exon6;Parent=Dca9368.1
scaffold140	Augustus	exon	63985	63998	.	-	.	ID=Dca9368.1.exon7;Parent=Dca9368.1