Carnation DB

Dca9379.1

Annotation

7-exons
f-1
sp|B9SHW1_RICCO#Xylem serine proteinase 1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0622480#GO:0005576;GO:0032440;GO:0042802;GO:0004252;GO:0043086;GO:0006508#3F2P1C
Repeat List (scaffold140)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9379.1	1	609	613	62.47	609	63	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SHW1_RICCO	166	776	777	78.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9379.1	1	610	613	59.21	610	58	0
Target_name	Start	End	Length	Cov(%)
Os01t0278950-00	167	795	796	79.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold140	Augustus	mRNA	194655	197243	.	+	.	ID=Dca9379.1;Parent=Dca9379
scaffold140	Augustus	exon	194655	194728	.	+	.	ID=Dca9379.1.exon1;Parent=Dca9379.1
scaffold140	Augustus	exon	194973	195513	.	+	.	ID=Dca9379.1.exon2;Parent=Dca9379.1
scaffold140	Augustus	exon	195615	195715	.	+	.	ID=Dca9379.1.exon3;Parent=Dca9379.1
scaffold140	Augustus	exon	195797	196039	.	+	.	ID=Dca9379.1.exon4;Parent=Dca9379.1
scaffold140	Augustus	exon	196178	196292	.	+	.	ID=Dca9379.1.exon5;Parent=Dca9379.1
scaffold140	Augustus	exon	196383	196596	.	+	.	ID=Dca9379.1.exon6;Parent=Dca9379.1
scaffold140	Augustus	exon	196690	197243	.	+	.	ID=Dca9379.1.exon7;Parent=Dca9379.1