Carnation DB

Dca9455.1

Annotation

10-exons
f-1
sp|A9PEV6_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005737;GO:0005524;GO:0017111;GO:0030163#2F1P1C
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase 4A | chr5:17248563-17251014 REVERSE LENGTH=399
Repeat List (scaffold1404)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9455.1	12	406	406	91.13	395	94	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PEV6_POPTR	5	399	399	98.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9455.1	12	406	406	90.64	395	93	0
Target_name	Start	End	Length	Cov(%)
AT5G43010.1	4	399	399	99.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1404	Augus-PASA	mRNA	10473	14475	.	+	.	ID=Dca9455.1;Parent=Dca9455
scaffold1404	Augus-PASA	exon	10473	10596	.	+	.	ID=Dca9455.1.exon1;Parent=Dca9455.1
scaffold1404	Augus-PASA	exon	11601	11720	.	+	.	ID=Dca9455.1.exon2;Parent=Dca9455.1
scaffold1404	Augustus	exon	11959	12095	.	+	.	ID=Dca9455.1.exon3;Parent=Dca9455.1
scaffold1404	PASA	exon	12388	12549	.	+	.	ID=Dca9455.1.exon4;Parent=Dca9455.1
scaffold1404	Augus-PASA	exon	12670	12756	.	+	.	ID=Dca9455.1.exon5;Parent=Dca9455.1
scaffold1404	Augus-PASA	exon	12843	12929	.	+	.	ID=Dca9455.1.exon6;Parent=Dca9455.1
scaffold1404	Augustus	exon	13012	13149	.	+	.	ID=Dca9455.1.exon7;Parent=Dca9455.1
scaffold1404	Augustus	exon	13253	13444	.	+	.	ID=Dca9455.1.exon8;Parent=Dca9455.1
scaffold1404	Augustus	exon	13532	13630	.	+	.	ID=Dca9455.1.exon9;Parent=Dca9455.1
scaffold1404	Augustus	exon	14401	14475	.	+	.	ID=Dca9455.1.exon10;Parent=Dca9455.1