Carnation DB

Dca9459.1

Annotation

5-exons
f-1
sp|F6HPN7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g00140#GO:0003676;GO:0000166;GO:0006397#2F1P0C
AT1G60200.1 | Symbols: | splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein | chr1:22200882-22205241 REVERSE LENGTH=899
Repeat List (scaffold1404)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9459.1	183	564	564	40.6	382	58	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|F6HPN7_VITVI	151	536	958	40.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9459.1	147	564	564	34.75	418	46	4e-70
Target_name	Start	End	Length	Cov(%)
AT1G60200.1	101	484	899	42.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1404	Augustus	mRNA	35628	41471	.	-	.	ID=Dca9459.1;Parent=Dca9459
scaffold1404	Augustus	exon	35628	35884	.	-	.	ID=Dca9459.1.exon1;Parent=Dca9459.1
scaffold1404	Augus-PASA	exon	36339	36780	.	-	.	ID=Dca9459.1.exon2;Parent=Dca9459.1
scaffold1404	Augus-PASA	exon	36972	37124	.	-	.	ID=Dca9459.1.exon3;Parent=Dca9459.1
scaffold1404	Augustus	exon	37244	37494	.	-	.	ID=Dca9459.1.exon4;Parent=Dca9459.1
scaffold1404	Augustus	exon	40880	41471	.	-	.	ID=Dca9459.1.exon5;Parent=Dca9459.1