Carnation DB

Dca9461.1

Annotation

9-exons
f-1
sp|D7TNS3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g00050#GO:0005737;GO:0051536;GO:0008173;GO:0006364#2F1P1C
sp|D7KXB2_ARALL#Radical SAM domain-containing protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_893522#GO:0005737;GO:0051536;GO:0008173;GO:0006364#2F1P1C
Repeat List (scaffold1404)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9461.1	16	440	442	69.9	425	73	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TNS3_VITVI	30	438	439	93.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9461.1	3	440	442	67.42	438	68	1e-176
Target_name	Start	End	Length	Cov(%)
AT1G60230.1	16	454	458	95.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1404	Augus-PASA	mRNA	49678	53657	.	-	.	ID=Dca9461.1;Parent=Dca9461
scaffold1404	Augus-PASA	exon	49678	49960	.	-	.	ID=Dca9461.1.exon1;Parent=Dca9461.1
scaffold1404	Augus-PASA	exon	50477	50613	.	-	.	ID=Dca9461.1.exon2;Parent=Dca9461.1
scaffold1404	Augus-PASA	exon	50699	50890	.	-	.	ID=Dca9461.1.exon3;Parent=Dca9461.1
scaffold1404	Augus-PASA	exon	51169	51277	.	-	.	ID=Dca9461.1.exon4;Parent=Dca9461.1
scaffold1404	Augus-PASA	exon	51359	51489	.	-	.	ID=Dca9461.1.exon5;Parent=Dca9461.1
scaffold1404	Augustus	exon	51619	51716	.	-	.	ID=Dca9461.1.exon6;Parent=Dca9461.1
scaffold1404	Augustus	exon	51804	51906	.	-	.	ID=Dca9461.1.exon7;Parent=Dca9461.1
scaffold1404	Augustus	exon	52917	53002	.	-	.	ID=Dca9461.1.exon8;Parent=Dca9461.1
scaffold1404	Augustus	exon	53468	53657	.	-	.	ID=Dca9461.1.exon9;Parent=Dca9461.1