Dca9464.1
Annotation
- 2-exons
- f-1
- sp|Q2QSG2_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g24220#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1404)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9464.1 |
1 |
340 |
340 |
63.23 |
340 |
55 |
3e-108
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QSG2_ORYSJ |
1057 |
1449 |
1597 |
24.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9464.1 |
56 |
340 |
340 |
31.47 |
285 |
38 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
971 |
1255 |
1401 |
20.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1404 |
Augustus |
mRNA |
72534 |
73702 |
. |
- |
. |
ID=Dca9464.1;Parent=Dca9464 |
| scaffold1404 |
Augustus |
exon |
72534 |
73389 |
. |
- |
. |
ID=Dca9464.1.exon1;Parent=Dca9464.1 |
| scaffold1404 |
Augustus |
exon |
73536 |
73702 |
. |
- |
. |
ID=Dca9464.1.exon2;Parent=Dca9464.1 |
