Carnation DB

Dca9478.1

Annotation

7-exons
f-1
sp|B9S511_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1719510#unknown#0F0P0C
AT5G48720.2 | Symbols: XRI, XRI1 | x-ray induced transcript 1 | chr5:19759233-19761621 FORWARD LENGTH=300
Repeat List (scaffold1405)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9478.1	1	244	244	49.18	244	45	1e-53
Target_name	Start	End	Length	Cov(%)
sp\|B9S511_RICCO	27	293	293	91.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9478.1	1	244	244	43.44	244	42	1e-41
Target_name	Start	End	Length	Cov(%)
AT5G48720.2	48	300	300	84.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1405	Augustus	mRNA	12158	13424	.	-	.	ID=Dca9478.1;Parent=Dca9478
scaffold1405	Augustus	exon	12158	12429	.	-	.	ID=Dca9478.1.exon1;Parent=Dca9478.1
scaffold1405	Augustus	exon	12520	12600	.	-	.	ID=Dca9478.1.exon2;Parent=Dca9478.1
scaffold1405	Augustus	exon	12687	12727	.	-	.	ID=Dca9478.1.exon3;Parent=Dca9478.1
scaffold1405	Augustus	exon	12811	12910	.	-	.	ID=Dca9478.1.exon4;Parent=Dca9478.1
scaffold1405	Augustus	exon	12998	13052	.	-	.	ID=Dca9478.1.exon5;Parent=Dca9478.1
scaffold1405	Augustus	exon	13152	13270	.	-	.	ID=Dca9478.1.exon6;Parent=Dca9478.1
scaffold1405	Augustus	exon	13358	13424	.	-	.	ID=Dca9478.1.exon7;Parent=Dca9478.1