Carnation DB

Dca10028.1

Annotation

6-exons
f-3
sp|Q9SHH1_ARATH#At1g17130#Arabidopsis thaliana (Mouse-ear cress)#Name=F20D23.18#unknown#0F0P0C
Repeat List (scaffold1435)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10028.1	1	133	219	50.22	133	80	7e-59
Target_name	Start	End	Length	Cov(%)
sp\|Q9SHH1_ARATH	54	191	331	41.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10028.1	1	133	219	50.68	133	77	1e-58
Target_name	Start	End	Length	Cov(%)
AT1G17130.2	54	198	338	42.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1435	Augustus	mRNA	2155	4429	.	+	.	ID=Dca10028.1;Parent=Dca10028
scaffold1435	Augustus	exon	2155	2195	.	+	.	ID=Dca10028.1.exon1;Parent=Dca10028.1
scaffold1435	Augustus	exon	2705	2854	.	+	.	ID=Dca10028.1.exon2;Parent=Dca10028.1
scaffold1435	Augustus	exon	2978	3112	.	+	.	ID=Dca10028.1.exon3;Parent=Dca10028.1
scaffold1435	Augustus	exon	3618	3701	.	+	.	ID=Dca10028.1.exon4;Parent=Dca10028.1
scaffold1435	Augustus	exon	3815	3822	.	+	.	ID=Dca10028.1.exon5;Parent=Dca10028.1
scaffold1435	Augustus	exon	4186	4429	.	+	.	ID=Dca10028.1.exon6;Parent=Dca10028.1