Dca10072.1
Annotation
- 3-exons
- f-1
- sp|Q850U9_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037J17.27#GO:0003676#1F0P0C
- Repeat List (scaffold14378)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10072.1 |
3 |
285 |
287 |
58.53 |
283 |
48 |
1e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q850U9_ORYSJ |
197 |
547 |
547 |
64.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10072.1 |
1 |
216 |
287 |
26.13 |
216 |
30 |
3e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1022 |
1266 |
1428 |
17.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14378 |
Augustus |
mRNA |
499 |
1745 |
. |
+ |
. |
ID=Dca10072.1;Parent=Dca10072 |
| scaffold14378 |
Augustus |
exon |
499 |
950 |
. |
+ |
. |
ID=Dca10072.1.exon1;Parent=Dca10072.1 |
| scaffold14378 |
Augustus |
exon |
1082 |
1164 |
. |
+ |
. |
ID=Dca10072.1.exon2;Parent=Dca10072.1 |
| scaffold14378 |
Augustus |
exon |
1417 |
1745 |
. |
+ |
. |
ID=Dca10072.1.exon3;Parent=Dca10072.1 |
