Carnation DB

Dca10076.1

Annotation

12-exons
f-1
sp|D7TJZ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g02700#GO:0005622;GO:0006396#0F1P1C
sp|G7L813_MEDTR#Pre-mRNA-processing factor#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_8g088050#GO:0005622;GO:0005488;GO:0006396#1F1P1C
Repeat List (scaffold1438)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10076.1	4	906	1135	37.35	903	44	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TJZ3_VITVI	3	966	1195	80.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10076.1	2	550	1135	24.84	549	51	5e-160
Target_name	Start	End	Length	Cov(%)
AT5G46400.1	25	575	1036	53.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1438	Augus-PASA	mRNA	9217	24144	.	+	.	ID=Dca10076.1;Parent=Dca10076
scaffold1438	Augus-PASA	exon	9217	9238	.	+	.	ID=Dca10076.1.exon1;Parent=Dca10076.1
scaffold1438	Augus-PASA	exon	9344	9444	.	+	.	ID=Dca10076.1.exon2;Parent=Dca10076.1
scaffold1438	Augus-PASA	exon	11722	11951	.	+	.	ID=Dca10076.1.exon3;Parent=Dca10076.1
scaffold1438	Augustus	exon	14097	14264	.	+	.	ID=Dca10076.1.exon4;Parent=Dca10076.1
scaffold1438	Augustus	exon	15864	16215	.	+	.	ID=Dca10076.1.exon5;Parent=Dca10076.1
scaffold1438	Augustus	exon	16309	16452	.	+	.	ID=Dca10076.1.exon6;Parent=Dca10076.1
scaffold1438	Augustus	exon	17178	17330	.	+	.	ID=Dca10076.1.exon7;Parent=Dca10076.1
scaffold1438	Augustus	exon	17420	17533	.	+	.	ID=Dca10076.1.exon8;Parent=Dca10076.1
scaffold1438	Augustus	exon	18732	18812	.	+	.	ID=Dca10076.1.exon9;Parent=Dca10076.1
scaffold1438	Augustus	exon	18961	19110	.	+	.	ID=Dca10076.1.exon10;Parent=Dca10076.1
scaffold1438	Augustus	exon	20213	22021	.	+	.	ID=Dca10076.1.exon11;Parent=Dca10076.1
scaffold1438	Augustus	exon	24061	24144	.	+	.	ID=Dca10076.1.exon12;Parent=Dca10076.1