Carnation DB

Dca1010.1

Annotation

5-exons
f-1
sp|F6HEU4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g04230#unknown#0F0P0C
AT1G68185.1 | Symbols: | Ubiquitin-like superfamily protein | chr1:25556542-25558173 FORWARD LENGTH=215
Repeat List (scaffold1028)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1010.1	3	225	227	49.33	223	50	1e-49
Target_name	Start	End	Length	Cov(%)
sp\|F6HEU4_VITVI	4	216	218	97.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1010.1	5	225	227	45.81	221	47	1e-42
Target_name	Start	End	Length	Cov(%)
AT1G68185.1	6	213	215	96.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1028	Augustus	mRNA	32847	35868	.	+	.	ID=Dca1010.1;Parent=Dca1010
scaffold1028	Augustus	exon	32847	32922	.	+	.	ID=Dca1010.1.exon1;Parent=Dca1010.1
scaffold1028	Augus-PASA	exon	33013	33068	.	+	.	ID=Dca1010.1.exon2;Parent=Dca1010.1
scaffold1028	Augus-PASA	exon	33192	33349	.	+	.	ID=Dca1010.1.exon3;Parent=Dca1010.1
scaffold1028	Augus-PASA	exon	34705	34930	.	+	.	ID=Dca1010.1.exon4;Parent=Dca1010.1
scaffold1028	Augus-PASA	exon	35701	35868	.	+	.	ID=Dca1010.1.exon5;Parent=Dca1010.1